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Code to reproduce figures of the manuscript "Activity-mediated accumulation of potassium induces a switch in firing pattern and neuronal excitability type" by Contreras, Schleimer, Gulledge, Schreiber

In this tutorial we will use auto to find the exact input current we need to inject to a neuron model to make it fire.

AUTO sympy interface

Generate AUTO continuation files automatically from sympy expressions

Some additionally useful functions on top of the brian2 project.

Brute force simulation of a special stochastic hybrid system.

Source files for the model of cooperative channels used in a dynamic clamp project.

Infer whether a spike train is generated from a bistable homoclinic or a monostable saddle-node neuron

Get history of a stream from itbtalk and save as markdown document.

everything related to my master thesis: A neuronal model for visually evoked escape responses in schooling fish